PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10028333
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 188aa    MW: 20123.3 Da    PI: 4.644
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10028333genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.41.6e-133885556
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                 ++ +rk +NRe+ArrsR+RK++ ++ L+  v++L++eN     e+ +  ++ 
  Lus10028333 38 RKRKRKLSNRESARRSRLRKQKHMDDLAAQVAQLKKENA----EILTSMNLN 85
                 5789**********************************7....555555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.4E-173498IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.683683IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-103680No hitNo description
SuperFamilySSF579591.04E-103887No hitNo description
PfamPF001704.6E-113879IPR004827Basic-leucine zipper domain
CDDcd147022.49E-183989No hitNo description
PROSITE patternPS0003604156IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MASSSTGASS GSSGGGGALL LRNSSSEEDL QAAVVDERKR KRKLSNRESA RRSRLRKQKH  60
MDDLAAQVAQ LKKENAEILT SMNLNTQLLL GVEADNSVLR AQADELNHRL ESLGEIVSYV  120
DSLRNGPVQA SGAPNNATGS SGTTSDGDDL FEEAAGTDEC LMTTNEMNPW ICSSSSYQPM  180
MMDMVMY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13643ERKRKRKL
23742RKRKRK
33758RKRKRKLSNRESARRSRLRKQK
45056RRSRLRK
55057RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009802821.18e-45PREDICTED: ocs element-binding factor 1-like
RefseqXP_016440531.18e-45PREDICTED: bZIP transcription factor 53-like
TrEMBLQ941L79e-45Q941L7_TOBAC; BZIP transcription factor BZI-2
STRINGPOPTR_0007s13380.18e-43(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-37basic leucine-zipper 44